working checkpoint system

orbiter/orbits/body.py

@@ -1,7 +1,7 @@
 from enum import Enum
 import numpy as np
 
-from ..units import Position, Velocity, Mass, Acceleration, Force
+from ..units import Position, Velocity, Mass, Acceleration
 
 class Body:
     """

orbiter/orbits/simulator.py

@@ -1,7 +1,7 @@
 from pathlib import Path
+import numpy as np
 
-from body import Body
+from .body import Body
-from ..units import Position, Velocity, Mass, Acceleration, Force
 
 class Simulator:
     """
@@ -31,7 +31,8 @@ class Simulator:
                 bodies: list[Body],
                 step_size: float,
                 steps_per_save: int,
-                output_file: Path
+                output_file: Path,
+                current_step: int = 0,
                 overwrite_output: bool = False
     ):
         if output_file.exists() and not overwrite_output:
@@ -40,43 +41,63 @@ class Simulator:
         self.output_file = output_file
         self.bodies = bodies
         self.step_size = step_size
-        self.steps_to_take = steps_to_take
         self.steps_per_save = steps_per_save
+        self.current_step = current_step
 
         if output_file.exists() and overwrite_output:
             print(f"Warning! Overwriting file: {output_file}")
 
-        _save_body_masses_to_file()
+        #self._save_body_masses_to_file()
-        _checkpoint()
+        self._checkpoint()
 
     
-        self.current_step = 0
-
     @classmethod
-    def from_checkpoint(cls, input_file: Path):
+    def from_checkpoint(cls, output_file: Path):
+        data = np.load("last_checkpoint.npz")
+        positions = data["positions"]
+        velocities = data["velocities"]
+        masses = data["masses"]
+        step_size = data["steps"][0]
+        current_step = data["steps"][1]
+        steps_per_save = data["steps"][2]
 
+        bodies = [
+            Body(val[0], val[1], val[2]) for val in zip(
+                positions, velocities, masses
+            )
+        ]
+        return cls(
+            bodies, 
+            step_size, 
+            steps_per_save,
+            output_file,
+            current_step,
+        )
 
-    def _save_body_masses_to_file(self):
-        masses_str = ' '.join([
-            str(body.m) for body in bodies
-        ]) + '\n'
-        #if saving masses, we are always starting a new file,
-        #this will overwrite file.
-        self.output_file.write_text(masses_str)
     
     def _checkpoint(self):
         """
         Two things - save high precision last checkpoint for resuming
         then save lower precision text for trajectories
         """
-        body_X_V_np = np.array([
+        body_X_np = np.array([
-            [body.X, body.Y] for body in self.bodies
+            body.X for body in self.bodies
         ])
-        body_ints_np = np.array([
+        body_V_np = np.array([
+            body.V for body in self.bodies
+        ])
+        body_m_np = np.array([
             body.m for body in self.bodies
         ])
-        body_m_np.append(self.step_size, self.current_step)
+        stepsz_n_np = np.array([
-        np.savez("last_checkpoint.npz", 
+            self.step_size,
-                array=body_X_V_np,
+            self.current_step,
-                ints = body_m_np)
+            self.steps_per_save
+        ])
+
+        np.savez("last_checkpoint.npz", 
+                positions=body_X_np,
+                velocities=body_V_np,
+                masses=body_m_np,
+                steps=stepsz_n_np)
 

orbiter/units.py

@@ -0,0 +1,9 @@
+import numpy as np
+
+Position = np.array
+
+Velocity = np.array
+
+Acceleration = np.array
+
+Mass = int

src/units.py

@@ -1,16 +0,0 @@
-import numpy as np
-
-class Position(np.array):
-    pass
-
-class Velocity(np.array):
-    pass
-
-class Acceleration(np.array):
-    pass
-
-class Force(np.array):
-    pass
-
-class Mass(int):
-    pass